Table 2

SNP	Chromosome Location	Nearest Gene	Gene Remarks	Minor Allele	Minor Allele Frequency		Odds Ratio	(95% CI)		p
Table 2. List of SNPs correlated with ovarian response
SNP	Chromosome Location	Nearest Gene	Gene Remarks	Minor Allele	Hypo-response group	Normo-/hyper response group	Odds Ratio	(95% CI)		p
rs870849	12: 6,777,854	LAG3	Missense, CDS variant	T	0.3725	0.1708	4.07	(2.065, 8.024)		5.04E-05
rs283815	19: 44,887,076	NECTIN2	Intron variant	G	0.3824	0.1777	3.685	(1.925, 7.055)		7.30E-05
rsl57582	19: 44,892,962	TOMM40	Intron variant	T	0.3725	0.1736	3.683	(1.91, 7.104)		IE-04
rs4485511	2: 141,401,398	LRP1B	Intron variant	c	0.6373	0.3926	3.226	(1.829, 5.69)		5.19E-05
rsl2458598	18: 13,238,716	LDLRAD4	Intron variant	A	0.598	0.343	2.954	(1.759, 4.961)		4.25E-05
rsl2458598	18: 13,238,716	C18orfl5	2KB Upstream Variant	A	0.598	0.343	2.954	(1.759, 4.961)		4.25E-05
rs3109350	2: 141,339,231	LRP1B	Intron variant	C	0.5686	0.2893	2.868	(1.762, 4.467)		2.22E-05
SNP	Chromosome Location	Nearest Gene	Gene Remarks	Minor Allele	Minor Allele Frequency		Continuous variable	Beta Coefficient	Beta Coefficient (95% CI)	p
SNP	Chromosome Location	Nearest Gene	Gene Remarks	Minor Allele	Hypo-response group	Normo-/ hyper response group	Continuous variable	Beta Coefficient	Beta Coefficient (95% CI)	p
rs4485511	2: 141,401,398	LRP1B	Intron variant	C	0.6373	0.3926	Mature oocyte	-3.38	(-4.863, -1.897)	1.44E-05
							AFC	-2.386	(-3.69, -1.082)	0.0004375
							AMH	-0.8236	(-1.529, -0.1179)	0.02341
rs8085876	18: 50,093,778	MY05B	Intron variant	G	0.3787	0.3605	Mature oocyte	-3.28	(-4.795, -1.765)	3.62E-05
							AFC	-1.549	(-2.904, -0.1936)	0.02639
							AMH	-0.8891	(-1.605, -0.173)	0.01599
rs7235513	18: 50,109,096	MY05B	Intron variant	A	0.3566	0.3517	Mature oocyte	-3.215	(-4.719, -1.71)	4.51E-05
							AFC	-1.639	(-2.98, -0.2974)	0.01773
							AMH	-0.8349	(-1.546, -0.1235)	0.02266

Note: threshold p value: 3E-06; CDS: Coding DNA Sequence, KB: kilobases; CI: confidence interval